Choose database to search: Individual Nematode Species (Nucleotide) Groups of Nematodes (Nucleotide) Protein Databases
Program blastn tblastn tblastx Database Angiostrongylus cantonensis Ancylostoma braziliense Ancylostoma caninum Anisakis simplex Ascaris lumbricoides Ascaris suum Ancylostoma ceylanicum Brugia malayi Brugia pahangi Bursaphelenchus mucronatus Bursaphelenchus xylophilus Caenorhabditis brenneri Caenorhabditis briggsae Caenorhabditis japonica Caenorhabditis remanei Caenorhabditis sp. 5 AC-2008 Ditylenchus africanus Dirofilaria immitis Dictyocaulus viviparus Globodera mexicana Globodera pallida Globodera rostochiensis Heterorhabditis bacteriophora Haemonchus contortus Heterodera glycines Heterodera schachtii Loa loa Litomosoides sigmodontis Meloidogyne arenaria Meloidogyne chitwoodi Meloidogyne hapla Meloidogyne incognita Meloidogyne javanica Meloidogyne paranaensis Necator americanus Nippostrongylus brasiliensis Onchocerca ochengi Oesophagostomum dentatum Onchocerca flexuosa Ostertagia ostertagi Onchocerca volvulus Parelaphostrongylus tenuis Pratylenchus penetrans Pristionchus pacificus Panagrolaimus superbus Parastrongyloides trichosuri Pratylenchus vulnus Parastrongyloides trichosuri Radopholus similis Steinernema carpocapsae Steinernema feltiae Strongyloides ratti Strongyloides stercoralis Toxocara canis Teladorsagia circumcincta Trichostrongylus vitrinus Toxascaris leonina Trichuris muris Trichinella spiralis Trichuris vulpis Wuchereria bancrofti Xiphinema index Zeldia punctata Perform ungapped alignment Databases updated every Sunday
The query sequence is filtered for low complexity regions by default. Enter here your input data as sequence in FASTA format
Alignment view Pairwise query-anchored showing identities query-anchored no identities flat query-anchored, show identities flat query-anchored, no identities query-anchored no identities and blunt ends flat query-anchored, no identities and blunt ends XML Blast output tabular Expect 0.0001 0.01 1 10 100 1000 Descriptions 0 10 20 50 100 250 500 Alignments 0 10 20 50 100 250 500
You may also want to use the parasite blast server at the EBI